If you do want to build MLton with SML/NJ, it is best to have a binary MLton package installed. If you don't, here are some issues you may encounter when you run make nj-mlton.
You will get (many copies of) the error message:
/bin/sh: mlton: not found
The Makefile calls mlton to determine dependencies, and can proceed in spite of this error.
If you don't have a mlton executable, you will get the error message:
Error: cannot upgrade basis because the compiler doesn't work
We use upgrade-basis.sml to work around basis library differences, allowing a version of MLton written for a newer basis library to be compiled by an older version of MLton. The file isn't necessary when building with SML/NJ, but is listed in $(SOURCES), so the Makefile is attempting to build it. Building upgrade-basis.sml requires the old version of MLton to be around so that the right stubs can be built.
To work around this problem, do one of the following.
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Manually tweak sources to remove $(UP) until you're finished building MLton with SML/NJ and have a working MLton.
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Build upgrade-basis.sml on some other machine with a working MLton and copy it over.
If you don't have an mllex executable, you will get the error message:
mllex: Command not found
Building MLton requires mllex and mlyacc executables, which are distributed with a binary package of MLton. The easiest solution is to copy the front-end lexer/parser files from a different machine (ml.grm.sml, ml.grm.sig, ml.lex.sml, mlb.grm.sig, mlb.grm.sml).